Extract executables by typing "tar xvf gismo_v2.0.tar"

Linux ('gismo') and Mac ('gismo.mac') versions are in the 'gismo_v2.0' directory.

The executable 'gismo' was compiled under a RedHat 5.9 Linux operating system 
(kernelrelease 2.6.18-371.1.2.el5) running on an Intel Xeon x86_64 machine.

Type ./gismo  for usage.

Extract CDD benchmark sets by typing "uncompress cdd_test_sets.tar.Z; tar xvf cdd_test_sets.tar"

The 'cdd_test_sets' directory contains CDD 'gold standard' alignments in fasta (cd00000.fasta) 
format.  It also contains the corresponding sequence sets (cd00000_gld.seq files). 

For further information contact:
 Andrew F. Neuwald
 Institute for Genome Sciences and
 Department of Biochemistry & Molecular Biology
 University of Maryland School of Medicine
 801 West Baltimore St.
 BioPark II, Room 617
 Baltimore, MD 21201
 Tel: 410-706-6724; Fax: 410-706-1482; E-mail: aneuwald@som.umaryland.edu
 Home page: http://www.igs.umaryland.edu/~aneuwald